Directory structure consists of : data/ - the data for training and testing model_baum_welch/ - the model file built with baum welch algorithm model_viterbi/ - the model file built with viterbi algorithm output_baum_welch/ - the output file obtained with baum welch and also the output obtained for obtaining the probabilities for best model output_viterbi/ - the output file obtained with viterbi and also the output obtained for obtaining the probabilities for best model report/ - document explaining this project scripts/ - perl scripts to process the entire code for different states src/ - consists of the hmm code downloaded from isip website.